Structure of PDB 8k27 Chain D Binding Site BS01

Receptor Information
>8k27 Chain D (length=302) Species: 979527 (Vibrio phage ICP1_2004_A) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKLKAPAVLAYSRKINPTNALMFAVNWSDRDNTTAVMVGTKTVAGTQSVR
GNPNDADKGNIQTVNFANLPHNKNTLLVKYNVKFVGDVFKAELGGGEYSN
TLQTALENTDFGTLAYRYVYNIAAGRTLWRNRVGAESIETVITVNDQTFT
FSDLLVNEFDEDVDVAEIADMVAGVLSGEGFVTLKVEHYMLLGEGSEVFP
SQEFVENSKLSKQLFDLNGQAAMHDQKIGNAIRTIDTWYEDATTPIAVEP
YGSVVRNGVAYRAGNKTDLFTLMDGAVNGKSLTEEDQMFVTANLIRGGVF
GG
Ligand information
>8k27 Chain P (length=60) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cuuaaagagucaacccuuugcuuaucuucccuauuuaaauguuagcagcc
gcauaggcug
.............................................<<<<<
.....>>>>>
Receptor-Ligand Complex Structure
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PDB8k27 Structure of csy complex with short DNA
Resolution3.6 Å
Binding residue
(original residue number in PDB)
A11 R14 V44 A45 G46 E93 L94 W130 Q203 F205 Q227 K228 N231 R234 R257 R297 G299 V300
Binding residue
(residue number reindexed from 1)
A10 R13 V43 A44 G45 E92 L93 W129 Q202 F204 Q226 K227 N230 R233 R256 R296 G298 V299
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