Structure of PDB 8j4b Chain D Binding Site BS01

Receptor Information
>8j4b Chain D (length=65) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MPICLVDGCDSDFSNCREYHKRHKVCDVHSKTPVVTINGHKQRFCQQCSR
FHALEEFDEGKRSCR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8j4b Chain D Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8j4b Molecular basis of SAP05-mediated ubiquitin-independent proteasomal degradation of transcription factors
Resolution2.0 Å
Binding residue
(original residue number in PDB)
C101 C106 C123 H126
Binding residue
(residue number reindexed from 1)
C4 C9 C26 H29
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005634 nucleus

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:8j4b, PDBe:8j4b, PDBj:8j4b
PDBsum8j4b
PubMed38326322
UniProtP0DI11|SP13B_ARATH Squamosa promoter-binding-like protein 13B (Gene Name=SPL13B)

[Back to BioLiP]