Structure of PDB 8iy2 Chain D Binding Site BS01
Receptor Information
>8iy2 Chain D (length=91) Species:
270673
(Pseudomonas phage PaP2) [
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NQHKKIKGYRDLSQEEIDMMNRVKELGSQFEKLIQDVSDHLRGQYNASLH
NRDEITRIANAEPGRWLAIGKTDIQTGMMAIIRAIAQPDSF
Ligand information
Ligand ID
3GP
InChI
InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-5(17)6(3(1-16)22-9)23-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKey
ZDPUTNZENXVHJC-UUOKFMHZSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc2c(n1C3C(C(C(O3)CO)OP(=O)(O)O)O)N=C(NC2=O)N
CACTVS 3.341
NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)[CH](O[P](O)(O)=O)[CH]3O
OpenEye OEToolkits 1.5.0
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO)OP(=O)(O)O)O)N=C(NC2=O)N
CACTVS 3.341
NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)[C@@H](O[P](O)(O)=O)[C@H]3O
ACDLabs 10.04
O=C1c2ncn(c2N=C(N)N1)C3OC(C(OP(=O)(O)O)C3O)CO
Formula
C10 H14 N5 O8 P
Name
GUANOSINE-3'-MONOPHOSPHATE
ChEMBL
DrugBank
DB03315
ZINC
ZINC000004807333
PDB chain
8iy2 Chain C Residue 206 [
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Receptor-Ligand Complex Structure
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PDB
8iy2
Phage anti-CBASS protein simultaneously sequesters cyclic trinucleotides and dinucleotides.
Resolution
2.76 Å
Binding residue
(original residue number in PDB)
Y11 M81
Binding residue
(residue number reindexed from 1)
Y9 M79
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8iy2
,
PDBe:8iy2
,
PDBj:8iy2
PDBsum
8iy2
PubMed
38103556
UniProt
Q6PVL0
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