Structure of PDB 8hra Chain D Binding Site BS01

Receptor Information

>8hra Chain D (length=848) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

KIIINLFAPNLPGSTKEDDLIQKSLRDQLVESIRNSINVFFVDGTRGAGK
TTFINSVVKSLNSDQDDVKVNIKCLPTIDPTKLPRHEPILVTVTARLNKM
VSDKLKGYWASNDYRKQKEQWQNHLAQLQRGLHLLTDKEYKPEYFSDALK
LDAQLDYSIGGQDLSEIFEELVKRACEILDCKAILITFDDIDTQFDAGWD
VLESIRKFFNSRKLVVVATGDLRLYSQLIRGKQYENYSKTLLEQEKESVR
LAERGYMVEHLEQQYLLKLFPVQKRIQLKTMLQLVGEKGKAGKEEIKVKT
EPGMQDIDAIDVRQAIGDAVREGLNLREGSDADMYVNELLKQPVRLLMQV
LQDFYTKKYHATSVPNLLRNALYGSMLSSIYRAGLNYEQHRFGMDSLCKD
IFTYVKQDRDFNTGFYLRPQSESEALRNCSIYLASQVSENCQGSLSKFLQ
MLLVGCGSVSIFNQFVTELARAENDREKFEQLISEYVAYMSVGRIESASH
WANRCCAVVANSPNDEKIGVFLGMVQLNRKSRQHMPGGYKKFNIDTENGL
AKAAMASSLSTVASNNLMDFCSVFNLIGAIADISACRCERSAITNAFNKV
IAQTTCIVPPWSEAAVRAEMKGSDDATEFSDAITKVEQWLKNVNEIEIGI
RPSALLIGKVWSRFYFNLNNVADQHKTRLYRNAEHGRMASQSNAAKIMRF
NVLAFLHAVLVEESLYHSVSDREYIGEGLRLNPVTSVDEFEKKIKIIGEK
LKADNKTWKNTHPLFFLLISCPILHPFIFPVGGINCSVKALNKETSFNKL
IDEIVGDKLLSDEEWDYLTKQQIFQNTITSLNSSTIVGASYDKDTPAR

Ligand information

>8hra Chain K (length=17) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

guccagcgucgcuggac

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Receptor-Ligand Complex Structure

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Structure summary

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PDB	8hra Molecular basis of RADAR anti-phage supramolecular assemblies.
Resolution	3.76 Å
Binding residue (original residue number in PDB)	N577 R578 K579 R581 Q582 N615 R666 K670
Binding residue (residue number reindexed from 1)	N528 R529 K530 R532 Q533 N566 R617 K621

External links

PDB	RCSB:8hra, PDBe:8hra, PDBj:8hra
PDBsum	8hra
PubMed	36764292

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