Structure of PDB 8hjt Chain D Binding Site BS01
Receptor Information
>8hjt Chain D (length=178) Species:
30538
(Vicugna pacos) [
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LFQPADVILDPNTANPILLVSDDQRSLQRADERQNLPDNPERFDWHYCVL
GCKSFTSGRHYWEVEVGDRKEWHIGVCQENVERKCWVKMTPENGFWTVGL
TDGSKYRALSDPRTKLTVANPPQRVGVFLDYETGEVSFYNAMDGSHIYTF
PHTFFSGPLWPVFRILTLEPTALTICPA
Ligand information
Ligand ID
H6P
InChI
InChI=1S/C5H12O8P2/c1-5(4-6)2-3-12-15(10,11)13-14(7,8)9/h2,6H,3-4H2,1H3,(H,10,11)(H2,7,8,9)/b5-2+
InChIKey
MDSIZRKJVDMQOQ-GORDUTHDSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.2
CC(=CCOP(=O)(O)OP(=O)(O)O)CO
ACDLabs 12.01
O=P(O)(O)OP(=O)(OC\C=C(/C)CO)O
CACTVS 3.370
CC(CO)=CCO[P](O)(=O)O[P](O)(O)=O
OpenEye OEToolkits 1.7.2
C/C(=C\CO[P@@](=O)(O)OP(=O)(O)O)/CO
CACTVS 3.370
C\C(CO)=C/CO[P](O)(=O)O[P](O)(O)=O
Formula
C5 H12 O8 P2
Name
(2E)-4-hydroxy-3-methylbut-2-en-1-yl trihydrogen diphosphate
ChEMBL
CHEMBL145233
DrugBank
ZINC
ZINC000008436838
PDB chain
8hjt Chain D Residue 601 [
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Receptor-Ligand Complex Structure
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PDB
8hjt
Phosphoantigens glue butyrophilin 3A1 and 2A1 to activate V gamma 9V delta 2 T cells.
Resolution
2.91 Å
Binding residue
(original residue number in PDB)
W380 H381 Y382 R442 R448 R499 L501
Binding residue
(residue number reindexed from 1)
W45 H46 Y47 R107 R113 R164 L166
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:8hjt
,
PDBe:8hjt
,
PDBj:8hjt
PDBsum
8hjt
PubMed
37674084
UniProt
A0A345DF50
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