Structure of PDB 8hfp Chain D Binding Site BS01

Receptor Information
>8hfp Chain D (length=83) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LSYQSHDCSGACLNPLQLPIKCHFQRRHAKTNSHSSALHVSYKTPCGRSL
RNVEEVFRYLLETECNFLFTDNFSFNTYVQLAR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8hfp Chain D Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8hfp Structural Evidence for Protein Binding by the Methyl-CpG-Binding Domain of SETDB Proteins
Resolution1.82 Å
Binding residue
(original residue number in PDB)
H14 C16 C20 C64
Binding residue
(residue number reindexed from 1)
H6 C8 C12 C46
Annotation score1
Enzymatic activity
Enzyme Commision number 2.1.1.366: [histone H3]-N(6),N(6)-dimethyl-lysine(9) N-methyltransferase.
Gene Ontology

View graph for
Molecular Function
External links
PDB RCSB:8hfp, PDBe:8hfp, PDBj:8hfp
PDBsum8hfp
PubMed38159574
UniProtQ96T68|SETB2_HUMAN Histone-lysine N-methyltransferase SETDB2 (Gene Name=SETDB2)

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