Structure of PDB 8h3h Chain D Binding Site BS01

Receptor Information
>8h3h Chain D (length=530) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGP
PGTGKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFD
QAYQMRPSIIFFDQIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEI
VVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILKIHTRDWNPK
PLDTFLEELAENCVGYCGADIKSICAEAALCALRRRYPQIYTTSEKLQLD
LSSINISAKDFEVAMQKMIPASQRAVTSPGQALSTVVKPLLQNTVDKILE
ALQRVFPHAEYQPMSFRPRILIVGEPGFGQGSHLAPAVIHALEKFTVYTL
DIPVLFGVSTTSPEETCAQVIREAKRTAPSIVYVPHIHVWWEIVGPTLKA
TFTTLLQNIPSFAPVLLLATSDKPHSALPEEVQELFIRDYGEIFNVQLPD
KEERTKFFEDLILKQAAKPPHERLKNLLKTVVKKSQNYNIFQLENLYAVI
SQCIYRHRKDHDKTSLIQKMEQEVENFSCS
Ligand information
Ligand IDATP
InChIInChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKeyZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
FormulaC10 H16 N5 O13 P3
NameADENOSINE-5'-TRIPHOSPHATE
ChEMBLCHEMBL14249
DrugBankDB00171
ZINCZINC000004261765
PDB chain8h3h Chain C Residue 1402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8h3h Structure of the human ATAD2 AAA+ histone chaperone reveals mechanism of regulation and inter-subunit communication.
Resolution3.15 Å
Binding residue
(original residue number in PDB)		S427 G429 P469 G470 T471 G472 K473 T474 L475 N575 H611 G636 K640
Binding residue
(residue number reindexed from 1)		S9 G11 P51 G52 T53 G54 K55 T56 L57 N157 H193 G218 K222
Annotation score5
Enzymatic activity
Enzyme Commision number 3.6.1.-
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity

View graph for
Molecular Function
External links
PDB RCSB:8h3h, PDBe:8h3h, PDBj:8h3h
PDBsum8h3h
PubMed37770645
UniProtQ6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 (Gene Name=ATAD2)

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