Structure of PDB 8g8g Chain D Binding Site BS01

Receptor Information
>8g8g Chain D (length=96) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASR
LAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Ligand information
>8g8g Chain I (length=174) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gaagtatgtgtctttattcacaagcttgcacaatccctgctggacaattc
tgagtgatggcagctcccacctttccttctttcttcacttagactacatt
tattcagcatctgtattgttggagtaagttccatgttaatactcaccact
gaggatatgttaataccacttaac
Receptor-Ligand Complex Structure
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PDB8g8g Histone modifications regulate pioneer transcription factor cooperativity.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		R27 Y39 I51 S52 S53 R83 S84 T85
Binding residue
(residue number reindexed from 1)		R1 Y13 I25 S26 S27 R57 S58 T59
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:8g8g, PDBe:8g8g, PDBj:8g8g
PDBsum8g8g
PubMed37225990
UniProtP02281|H2B11_XENLA Histone H2B 1.1

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