Structure of PDB 8fun Chain D Binding Site BS01

Receptor Information

>8fun Chain D (length=370) Species: 1219028 (Rhodococcus wratislaviensis NBRC 100605) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

EHGSLGTLPAPSVTTGIVDADIHPVPQDGALEPYLDDRWKKHIREYGVRT
TTGLQFISEYPQMYGGAMRADAWPESGYPGSDRELLRTQLLDKHNIQLGV
LQCLAPGGQTLNPAGQALNQELAAALCRATNDWQLEHLVYPDPRMRAAIP
VTFETPDYAVAEIERVGADPGVVAVLGTSKTLEPLGSRKYWPIYEASVAQ
NLPIQFHLSQGGGHANTGTGWTSYHTEYHTGHVQSFQSQLLSLVLSGTFD
RFPTLKVMFVEGNVAHFAPLIQRMDYTWETLRGELPDLQRKPSEYIRDHI
WASTQPIDEPEKPEHLAELLEEFCGDNVVFATDYPHFDFDDPETAFPRSF
PVDLRDKILRGNGMRFFGVT

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

8fun Chain D Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	8fun Enzymatic Hydroxylation of Aliphatic C-H Bonds by a Mn/Fe Cofactor.
Resolution	2.24 Å
Binding residue (original residue number in PDB)	D25 H27 H211 E265 D337
Binding residue (residue number reindexed from 1)	D21 H23 H207 E261 D333
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0016787	hydrolase activity
GO:0016829	lyase activity
GO:0016831	carboxy-lyase activity
GO:0046872	metal ion binding

	Biological Process
GO:0019748	secondary metabolic process

	Cellular Component
GO:0005737	cytoplasm

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:8fun, PDBe:8fun, PDBj:8fun
PDBsum	8fun
PubMed	37471626
UniProt	A0A402C2Q3

[Back to BioLiP]