Structure of PDB 8fhw Chain D Binding Site BS01
Receptor Information
>8fhw Chain D (length=432) Species:
235443
(Cryptococcus neoformans var. grubii H99) [
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LIVVSNRLPVTIGGLVSALFTWIGWPGKDIPMDRETVNRRLLDEYCYPVY
LSDELADSHYNGFSNSILWPLFHYHPGEMNFDAAHWLAYREANMRFADVV
SSLVQAGDMVWVQDYHLMLLPMLLRSMIRIGFFLHTPFPSSEIYRILPVR
REILLGVLQCDLIGFHTYDYARHFLSSCTRILGLETQPNGIEFDGRYCQV
GTFPIGIDPNQFIEGLQKESIVKRLRSLEARFEGVKVIIGVDRLDYIKGI
PQKLQALETFLTQHPEWIGKVVLVQLAIPSRQDVEEYQDLRACVNELVGR
INGRFGTVESVPIHYMHKSVPFEELTAMYALADACLVTSTRDGMNLVAYE
YISSQAERHGSMILSEFAGAAQSFNGSLLINPWDVQSTADAINQALTLSP
QQRKTNWQKLFNYVSKYTAEAWGVSFVNELNR
Ligand information
Ligand ID
UDP
InChI
InChI=1S/C9H14N2O12P2/c12-5-1-2-11(9(15)10-5)8-7(14)6(13)4(22-8)3-21-25(19,20)23-24(16,17)18/h1-2,4,6-8,13-14H,3H2,(H,19,20)(H,10,12,15)(H2,16,17,18)/t4-,6-,7-,8-/m1/s1
InChIKey
XCCTYIAWTASOJW-XVFCMESISA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.0
C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)OP(=O)(O)O)O)O
CACTVS 3.370
O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
CACTVS 3.370
O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(O)=O)N2C=CC(=O)NC2=O
OpenEye OEToolkits 1.7.0
C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)O)O)O
ACDLabs 12.01
O=P(O)(O)OP(=O)(O)OCC2OC(N1C(=O)NC(=O)C=C1)C(O)C2O
Formula
C9 H14 N2 O12 P2
Name
URIDINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL130266
DrugBank
DB03435
ZINC
ZINC000004490939
PDB chain
8fhw Chain D Residue 701 [
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Receptor-Ligand Complex Structure
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PDB
8fhw
Structures of trehalose-6-phosphate synthase, Tps1, from the fungal pathogen Cryptococcus neoformans: a target for novel antifungals
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
R415 K420 I450 S491 V492 L497 E522
Binding residue
(residue number reindexed from 1)
R243 K248 I278 S319 V320 L325 E350
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0004805
trehalose-phosphatase activity
GO:0016758
hexosyltransferase activity
Biological Process
GO:0005992
trehalose biosynthetic process
GO:0034605
cellular response to heat
GO:0070413
trehalose metabolism in response to stress
Cellular Component
GO:0005829
cytosol
GO:0005946
alpha,alpha-trehalose-phosphate synthase complex (UDP-forming)
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8fhw
,
PDBe:8fhw
,
PDBj:8fhw
PDBsum
8fhw
PubMed
36993618
UniProt
J9VJZ1
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