Structure of PDB 8enc Chain D Binding Site BS01
Receptor Information
>8enc Chain D (length=371) Species:
9823
(Sus scrofa) [
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TTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV
GDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTL
LTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLD
SGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTA
EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNER
FRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGTT
MYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQ
MWISKQEYDEAGPSIVHRKCF
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
8enc Chain D Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
8enc
Myosin loop-4 is critical for optimal tropomyosin repositioning on actin during muscle activation and relaxation.
Resolution
3.6 Å
Binding residue
(original residue number in PDB)
G13 S14 L16 K18 D157 K213 E214 G302 Y306
Binding residue
(residue number reindexed from 1)
G9 S10 L12 K14 D153 K209 E210 G298 Y302
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0017022
myosin binding
Biological Process
GO:0007015
actin filament organization
GO:0010628
positive regulation of gene expression
GO:0033275
actin-myosin filament sliding
GO:0060047
heart contraction
GO:0090131
mesenchyme migration
Cellular Component
GO:0005737
cytoplasm
GO:0005884
actin filament
GO:0030017
sarcomere
GO:0030027
lamellipodium
GO:0030175
filopodium
GO:0044297
cell body
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:8enc
,
PDBe:8enc
,
PDBj:8enc
PDBsum
8enc
PubMed
36459134
UniProt
B6VNT8
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