Structure of PDB 8dzf Chain D Binding Site BS01

Receptor Information
>8dzf Chain D (length=413) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VEKRASMLLFECAEMRVSDLHIKVYDAEADIYIRKDGDMELLRQIESNTA
HSILASLYNNADDSDATYKINAYQAARIVASKSRLALPPVIQAVRLQFNP
LGQGGRYLIARFLYTDDPTRFGFHHSHAESFSRMRNLPIGINIISGPTGS
GKSTTLKNLLELLYIEKKKKVNIISIEDPPEYEITAQLPTEAQRGEEYRK
AITAALRSDPDIIMPGEARDAEVINLLFTAAMTGHQVWTSLHANNALAIF
DRLKDQGVDEFKLTDPELITGLVAQRLVRKLCAQCSITLTEYIASGGGIS
DTDRKIISGHETSVRFPNPRAKKCCRDGYNGRTILAEVIEPDSKLLRLVA
EGKREDAQHYWLTSLHGMALKEHAWLKIISGEICVMDAVNKISGIDNITE
ERKKYLFSRDNEI
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8dzf Chain D Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8dzf Cryo-EM Structure of the Type IV Pilus Extension ATPase from Enteropathogenic Escherichia coli.
Resolution3.69 Å
Binding residue
(original residue number in PDB)
C403 C406 C445 C446
Binding residue
(residue number reindexed from 1)
C282 C285 C324 C325
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0016887 ATP hydrolysis activity
Cellular Component
GO:0005886 plasma membrane

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Molecular Function

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Cellular Component
External links
PDB RCSB:8dzf, PDBe:8dzf, PDBj:8dzf
PDBsum8dzf
PubMed36326250
UniProtB7UTD6

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