Structure of PDB 8c5z Chain D Binding Site BS01

Receptor Information
>8c5z Chain D (length=175) Species: 29292 (Pyrococcus abyssi) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TYTRKKIKDIEAGDRFVEVRGTIAKVYRVLTYDACPECKKKVDYDEGLGV
WICPEHGEVQPIKMTILDFGLDDGTGYIRVTLFGDDAEELLGVSPEEIAE
KIKELEESGLTTKEAARKLAEDEFYNIIGREIVVRGNVIEDRFLGLILRA
SSWEDVDYRREIERIKEELEKLGVM
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8c5z Chain D Residue 500 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8c5z DNA-binding mechanism and evolution of replication protein A.
Resolution3.8 Å
Binding residue
(original residue number in PDB)		C218 C236 H239
Binding residue
(residue number reindexed from 1)		C35 C53 H56
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0046872 metal ion binding
Biological Process
GO:0000724 double-strand break repair via homologous recombination
GO:0010212 response to ionizing radiation

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Molecular Function
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Biological Process
External links
PDB RCSB:8c5z, PDBe:8c5z, PDBj:8c5z
PDBsum8c5z
PubMed37087464
UniProtG8ZHS0

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