Structure of PDB 8axf Chain D Binding Site BS01

Receptor Information
>8axf Chain D (length=263) Species: 1980427 (Emaravirus fici) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DLKPIDVEVQAFTSASQNISNFTLHKYRNICHVDTCAAHLSKSKENKEKL
QARNLRLIVSSNEFLVVVKELNDSTVDNVVSFNKACAIMSAGVLKHTFDE
EFDWKLSKYVKTNNTTKVIPDVKIINRLAGQMGLSAGNPYYWMIVPGYEF
LYELYPAEVLAYTLVRLQYRKNLNIPDSMTDADIVSSLVMKMNRIHKLEQ
TSFDEALNLIGKDNVSEAYVELARDIGSTSKTKRNDEAILKFRELIASFL
PALEADRIASAHV
Ligand information
>8axf Chain Q (length=42) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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Receptor-Ligand Complex Structure
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PDB8axf RNA Encapsulation Mode and Evolutionary Insights from the Crystal Structure of Emaravirus Nucleoprotein.
Resolution2.54 Å
Binding residue
(original residue number in PDB)		F63 S65 N69 K95 E121 L122 N123 S132 N134 R178 L179 G181 Q182 P197 F201 R217 L224 N225 P227 M230 M241 K242 N244 R245 R285
Binding residue
(residue number reindexed from 1)		F12 S14 N18 K44 E70 L71 N72 S81 N83 R127 L128 G130 Q131 P146 F150 R166 L173 N174 P176 M179 M190 K191 N193 R194 R234
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid

View graph for
Cellular Component
External links
PDB RCSB:8axf, PDBe:8axf, PDBj:8axf
PDBsum8axf
PubMed37039649
UniProtI2FFM8

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