Structure of PDB 8a0m Chain D Binding Site BS01

Receptor Information
>8a0m Chain D (length=975) Species: 727 (Haemophilus influenzae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VDKTWLFGSYAWQGNPKALFLYMLVNCKETHECWWVADNEESMKSIKKST
GLKNITFTDSEKAKELFPHADVYVTENFRESYPVYMNENIKVFNTWHGVG
LKHIELALGMNSVLAESIVRKYVRNYDIYKNNVLFLTTSQAMEDHFLEDM
AISKELIIRGKYPRNAVYGPNGIHTYDINTLLPKNKSQYSQTILFCPTWN
DDYDIYEAFNSIDLAISSIFYDLLDAGVEKFISTKRKQYLMDYFFGFKKE
NKSMESLIADVDNCQLQPKSLKELHTFDIFDTLIRRSTLRPFSIFDYVRD
KAKASGIKFPLALTENWINVRNRAEHDVRDIMRKTTFERQSDKIEITLDD
IYTRLQKNLLLTDEQTDFLKQAEIEAEIAHVEPIQKRINYLFSLKAKGHD
VAMASDMYLPEDVIYKMLDRADTRLREIPLYLSSTIGYQKSTGKLYQHIF
FDLDYQYSRWTHYGDNKHADGSVPRRLGIQTAVHDIDDFIPFENAMVNAM
DNYNRYPAYQLATKMHRYRTQLVQENGFGNTLFETKYYNYAYVGASFVPY
INWAIKDAIKRGYETIYFISRDGHFLKQIADKIIEIRGYNVKTKYIYGSR
KAWRLPSFITKVDDETFWQFGNFVGMDSFEDLVPEFESLRHENIRKIFKN
SPAYHEKVLAIAAEKRKMVRQYIQQEINPKEKFAFVEFWGRGYTQDTFGR
LLNDAFGKEVKNPFYYVRSFTDDMGTSVRHNFILAPQNFSFFEPIFAQTP
YDSIPDYYEEKGRIEPIINHRDRSVSDLISEGLLKFTEDYLALNTQDEDY
FDAALSQFNYQYQLNTPNDQFICNVFSELKKPYAPALTLKQLESITSKQE
LDKLTQSIPISLSKSDVKVIDYYNKIQKNYNLPAYNSTPMRKAYAVNPLE
QYVWSTQVPFRVLSLKQNSFYLDVSFAETTKRKDIFLKELNEIDVIAVDW
LKGGVPRLLTEHGYITAHKDWVKKS
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8a0m Chain D Residue 1201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8a0m A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule.
Resolution3.6 Å
Binding residue
(original residue number in PDB)		D386 F388 D573
Binding residue
(residue number reindexed from 1)		D278 F280 D465
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0046872 metal ion binding
GO:0047355 CDP-glycerol glycerophosphotransferase activity
Biological Process
GO:0019350 teichoic acid biosynthetic process
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8a0m, PDBe:8a0m, PDBj:8a0m
PDBsum8a0m
PubMed37277468
UniProtQ2ERG0

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