Structure of PDB 7zc6 Chain D Binding Site BS01

Receptor Information
>7zc6 Chain D (length=304) Species: 1553 (Clostridium tetanomorphum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YTVSSSPHIRAKDTTQSIMRDVVIALLPATIAGVYFFKLQGLLVILASVL
SCVVAEYIWQKASKKKVTVGDYSAVVTGLLLAFNVPASIPLWIPVVGGFF
AIIVVKQFFGGLGQNIVNPALAARAFLLASWPVQMTSWTLDGVTTATPLA
ILKGNEATGAAAPDLMSVFIGHVGGCIGETSALALLIGGAYLFYKHIIDW
RIPVSFIGTTFIFTAIAGRGSSPVYELFAGGLMLGAIFMATDYATSPITP
LGRIIFGVGCGVITSLIRIFGGYPEGVSYSILVMNLFVPLIERWTAPKIF
GKVK
Ligand information
Ligand IDFMN
InChIInChI=1S/C17H21N4O9P/c1-7-3-9-10(4-8(7)2)21(15-13(18-9)16(25)20-17(26)19-15)5-11(22)14(24)12(23)6-30-31(27,28)29/h3-4,11-12,14,22-24H,5-6H2,1-2H3,(H,20,25,26)(H2,27,28,29)/t11-,12+,14-/m0/s1
InChIKeyFVTCRASFADXXNN-SCRDCRAPSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)CC(C(C(COP(=O)(O)O)O)O)O
OpenEye OEToolkits 1.7.6Cc1cc2c(cc1C)N(C3=NC(=O)NC(=O)C3=N2)C[C@@H]([C@@H]([C@@H](COP(=O)(O)O)O)O)O
ACDLabs 12.01N=2C(=O)NC(=O)C3=Nc1cc(C)c(C)cc1N(C=23)CC(O)C(O)C(O)COP(=O)(O)O
CACTVS 3.385Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[CH](O)[CH](O)[CH](O)CO[P](O)(O)=O)c2cc1C
CACTVS 3.385Cc1cc2N=C3C(=O)NC(=O)N=C3N(C[C@H](O)[C@H](O)[C@H](O)CO[P](O)(O)=O)c2cc1C
FormulaC17 H21 N4 O9 P
NameFLAVIN MONONUCLEOTIDE;
RIBOFLAVIN MONOPHOSPHATE
ChEMBLCHEMBL1201794
DrugBankDB03247
ZINCZINC000003831425
PDB chain7zc6 Chain D Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7zc6 Purification and structural characterization of the Na + -translocating ferredoxin: NAD + reductase (Rnf) complex of Clostridium tetanomorphum.
Resolution4.27 Å
Binding residue
(original residue number in PDB)		R130 W144 T153 C182 E185 G237 P280 E281 V283 S284
Binding residue
(residue number reindexed from 1)		R124 W138 T147 C176 E179 G231 P274 E275 V277 S278
Annotation score4
Enzymatic activity
Enzyme Commision number 7.-.-.-
Gene Ontology
Biological Process
GO:0022900 electron transport chain
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7zc6, PDBe:7zc6, PDBj:7zc6
PDBsum7zc6
PubMed36274063
UniProtA0A923IYK2

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