Structure of PDB 7vbm Chain D Binding Site BS01

Receptor Information
>7vbm Chain D (length=92) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAH
YNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS
Ligand information
>7vbm Chain I (length=126) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cccggtgccgaggccgctcaattggtcgtagacagctctagcaccgctta
aacgcacgtacgcgctgtcccccgcgttttaaccgccaaggggattactc
cctagtctccaggcacgtgtcagata
Receptor-Ligand Complex Structure
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PDB7vbm Unusual nucleosome formation and transcriptome influence by the histone H3mm18 variant.
Resolution3.4 Å
Binding residue
(original residue number in PDB)
R33 Y42 S56 R86 S87
Binding residue
(residue number reindexed from 1)
R1 Y10 S24 R54 S55
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

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Molecular Function

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Cellular Component
External links
PDB RCSB:7vbm, PDBe:7vbm, PDBj:7vbm
PDBsum7vbm
PubMed34929737
UniProtQ9D2U9|H2B3A_MOUSE H2B.U histone 2 (Gene Name=H2bu2)

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