Structure of PDB 7uft Chain D Binding Site BS01

Receptor Information
>7uft Chain D (length=1032) Species: 216816 (Bifidobacterium longum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LKVNREIDRCKRVMRERVWPHIHQVLAQCTVGAVKNPGEPEMPAAFITRA
VSGQVIFQPLAVGEPWGTSWGTTWIRVEGQLPETLPEGRAIELVFNLGWL
EWPVGGHIEAMAYRADGTVIKALHPRNHWMPLVSADGVKDRVVNPDGSFV
VYVEGAYNPNVPSFTVTELGTKPTGKADERYEFSSIDIAALDQDMFDYWA
DLDVVTGSLENMNDADPRYWKLAKAMQRSINLWDEKDYNTLALARKALDK
VMHNPANASAMTLTAMGHSHIDSAWLWPVRETERKVGRTVSNALALMDID
PDFTYVMSAAQHFAWLEERHPDLFERVKARIAEGRFIPVGGMWVESDGTM
PCGESLIRQISYGKRYFKEKLGVVPNGIWLPDSFGYTGAWPQIAKRSGYS
WFLTQKLCWNDTTRLPHHSFMWEGVDGSQIFTHFPPADKYDSDMSANDMA
YVQSNYKDKDLSDRGILLFGYGDGGGGPIREMTMREHRFESFEGMPKVEY
GTPDDFFSKAETEMKAEAGSEMPRWKGEFYFELHRKTLTSQQEMKRGCRK
EESMLRTVEYLGVVASLESADYVYPTERIDRIWKTLLLSQFHDILPGSAI
EWAHRVAREEYARDLKALSDIARDAIAAIAVANPDVARIAKARISQFADV
DPWRPASLVSCGEPVEVNRREDGSATLDNGLLCVHVAADGTVDSMIDLKS
GREMVAKDHVMGRYEILKDEPGVFDAWDVERDAFLCATALADGHIVSIET
TADGSAVIVTKNSYRDDEISTTITLRPGKSQLDFHADVEWNVPEKLLKVD
IPMALSASRAQYECQYGLIERPIVKNTEGEEAMFESCSHRFVRIHDSSYG
IGVANGSTYGSDVSSLRDRDDALAGTMVRMSLVAAPTAPDPRTDIGHHEF
DWTVLPCASVAPLVAAAGEINAPTIENMPDIAAPITLEPIEGTPVIDWIK
LADDGSGDIVARLYEAAGAKAKAMLHVGGTLDGWTVRETNTLEQDESYPD
EPAGLIGGKQQAEGAELALNPFQLTTLRLSRA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7uft Chain D Residue 1101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7uft Cryo-EM Structure of Bl_Man38C at 2.9 A
Resolution2.9 Å
Binding residue
(original residue number in PDB)		H272 D274 D384 H594
Binding residue
(residue number reindexed from 1)		H270 D272 D382 H592
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004559 alpha-mannosidase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006013 mannose metabolic process
GO:0009313 oligosaccharide catabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:7uft, PDBe:7uft, PDBj:7uft
PDBsum7uft
PubMed
UniProtQ8G4P9

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