Structure of PDB 7qoh Chain D Binding Site BS01
Receptor Information
>7qoh Chain D (length=456) Species:
2301731
(Bacteroides phage crAss001) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AGKLGKFQMLGFQHWAPQKATNLMVQLLAFYRGKSLDTFLNSFPTREFED
DNEYYWDVIGSSRRNIPLVEARDENGVVVAANAANVGVGTSPFYLVFPED
WFADGEVIVGNLNQVYPFRILGDARMEGTNAVYKVELMGGNTQGVPAERL
QQGERFSIEFAPVEKELSRKVGDVRFTSPVSMRNEWTTIRIQHKVGNKLN
KKLAMGIPMVRNLWMHYVDWEVELQFDEYKNNAMAWGTSNRNLNGEYMNF
GKSGNAIKTGAGIFEQTEVANTMYYNTFSLKLLEDALYELSASKLAMDDR
LFVIKTGERGAIQFHKEVLKTVSGWTTFVLDNNSTRVVEKVQSRLHSNAL
SAGFQFVEYKAPNGVRVRLDVDPFYDDPVRNKILHPMGGVAFSYRYDIWY
IGTMDQPNIFKCKIKGDNEYRGYQWGSAVIHRMATLGVCVLDPTRTMSLI
PAILQG
Ligand information
>7qoh Chain m (length=17) Species:
2301731
(Bacteroides phage crAss001) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
AVDQMDNIDERYGFVNQ
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7qoh
Structural atlas of a human gut crassvirus.
Resolution
3.32 Å
Binding residue
(original residue number in PDB)
M40 Q42 R48 G49 K50 S51 T54 W243 M244 H245 Y246 W249 P402
Binding residue
(residue number reindexed from 1)
M24 Q26 R32 G33 K34 S35 T38 W214 M215 H216 Y217 W220 P373
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Cellular Component
GO:0019028
viral capsid
View graph for
Cellular Component
External links
PDB
RCSB:7qoh
,
PDBe:7qoh
,
PDBj:7qoh
PDBsum
7qoh
PubMed
37138077
UniProt
A0A385DVU6
|CAPSD_BPCA1 Major capsid protein (Gene Name=crAss001_32)
[
Back to BioLiP
]