Structure of PDB 7nt5 Chain D Binding Site BS01

Receptor Information
>7nt5 Chain D (length=395) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IFEEAASFRSYQSKLGRDGRASAATATLTTKIRIFVPATNSPELRWELTL
FALDVIRSPSAAESMKVGAAFTLISMYSERPGALIRSLLNDPDIEAVIID
VGSMVNGIPVMERRGDKAQEEMEGLMRILKTARDSSKGKTPFVDSRAYGL
RITDMSTLVSAVITIEAQIWILIAKAVTAPDTAEESETRRWAKYVQQKRV
NPFFALTQQWLTEMRNLLSQSLSVRKFMVEILIEVKKGGSAKGRAVEIIS
DIGNYVEETGMAGFFATIRFGLETRYPALALNEFQSDLNTIKSLMLLYRE
IGPRAPYMVLLEESIQTKFAPGGYPLLWSFAMGVATTIDRSMGALNINRG
YLEPMYFRLGQKSARHHAGGIDQNMANRLGLSSDQVAELAAAVQE
Ligand information
>7nt5 Chain N (length=78) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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Receptor-Ligand Complex Structure
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PDB7nt5 CryoEM structure of the Nipah virus nucleocapsid assembly.
Resolution3.5 Å
Binding residue
(original residue number in PDB)		K178 T181 A182 R192 R193 K196 Q199 Q200 N257 Y258 G263 A265 Q319 A323 S344 M345 A347 L348 N349 R352 Y354
Binding residue
(residue number reindexed from 1)		K175 T178 A179 R189 R190 K193 Q196 Q197 N254 Y255 G260 A262 Q316 A320 S341 M342 A344 L345 N346 R349 Y351
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0005198 structural molecule activity
GO:0005515 protein binding
GO:0060090 molecular adaptor activity
Biological Process
GO:0039689 negative stranded viral RNA replication
GO:0039697 negative stranded viral RNA transcription
Cellular Component
GO:0019013 viral nucleocapsid
GO:0019029 helical viral capsid
GO:0030430 host cell cytoplasm
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:7nt5, PDBe:7nt5, PDBj:7nt5
PDBsum7nt5
PubMed34270629
UniProtQ9IK92|NCAP_NIPAV Nucleoprotein (Gene Name=N)

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