Structure of PDB 7eps Chain D Binding Site BS01
Receptor Information
>7eps Chain D (length=305) Species:
32630
(synthetic construct) [
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PKILIIGANGQIGSELALALAERYGRENVIASDVVPTLPFEVLNATDRGE
LATVVERHGITQVYLLAAALSATGEKAPQWAWNLNMTSLLNVLELARQTG
LEKIFWPSSIAAFGPTTPAGQTPQKTVMEPTTVYGISKQAGEGWCRWYHA
NHGVDVRSIRYPGLISHKTPPGGGTTDYAVDIFHAAVTGEPYTCFLKEDE
ALPMMYMPDAIRATIELMEAPADKLSERGSYNIAGMSFTPAQIAAAIREQ
VPGFQIRYEPDYRQAIAQGWPDSIDDSVARADWGWKAQYGLKEMVADMLA
NLKAT
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
7eps Chain D Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
7eps
Partial Consensus Design and Enhancement of Protein Function by Secondary-Structure-Guided Consensus Mutations.
Resolution
2.102 Å
Binding residue
(original residue number in PDB)
G12 N14 G15 Q16 I17 D38 V39 L53 N54 A55 L76 A77 A78 L94 P117 S119 Y144 K148 Y171 L174
Binding residue
(residue number reindexed from 1)
G7 N9 G10 Q11 I12 D33 V34 L43 N44 A45 L66 A67 A68 L84 P107 S109 Y134 K138 Y161 L164
Annotation score
4
External links
PDB
RCSB:7eps
,
PDBe:7eps
,
PDBj:7eps
PDBsum
7eps
PubMed
34254784
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