Structure of PDB 7epr Chain D Binding Site BS01
Receptor Information
>7epr Chain D (length=284) Species:
32630
(synthetic construct) [
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KILIVGACGQIGSELALALAERYGNTNVITSDIRTHEMLDATDRGELATV
VERHKITQVYLLAALLSATGEKNPQWAWNLNMTSLLNVLELARIKRVFWP
SSIAVFGPTTPKENTPQYTVMEPSTVYGISKQAGEGWCRWYHANHGVDVR
SVRYPGLISWKTPPGGGTTDYAVDIFHAAVTGTCFLSEDTALPMMYMPDA
IRATIELMEAPADKIKIRSSYNLAGMSFTPAQIAAAIISYEPDYRQAIAD
SWPASIDDSVARADWGWKPEFDLKEMVADMLANL
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
7epr Chain D Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
7epr
Partial Consensus Design and Enhancement of Protein Function by Secondary-Structure-Guided Consensus Mutations.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
G15 Q16 I17 D38 I39 L53 D54 A55 L76 A77 A78 L94 P117 Y144 K148 Y171 L174 G182
Binding residue
(residue number reindexed from 1)
G9 Q10 I11 D32 I33 L39 D40 A41 L62 A63 A64 L80 P100 Y127 K131 Y154 L157 G165
Annotation score
4
External links
PDB
RCSB:7epr
,
PDBe:7epr
,
PDBj:7epr
PDBsum
7epr
PubMed
34254784
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