Structure of PDB 7drm Chain D Binding Site BS01

Receptor Information
>7drm Chain D (length=309) Species: 391625 (Plesiocystis pacifica SIR-1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SHMTNLDTSIVVVGSPDDLHVQSVTEGLRARGHEPYVFDTQRFPEEMTVS
LGEQGASIFVDGQQIARPAAVYLRSLYQSPDADKAMQDNWRRTLLAFRER
STLMSAVLLRWEEAGTAVYNSPRASANITKPFQLALLRDAGLPVPRSLWT
NDPEAVRRFHAEVGDCIYKPVAGGARTRKLEAKDLEADRIERLSAAPVCF
QELLTGDDVRVYVIDDQVICALRIVDEIDFRQAEERIEAIEISDEVKDQC
VRAAKLVGLRYTGMDIKAGADGNYRVLELNASAMFRGFEGRANVDICGPL
CDALIAQTK
Ligand information
>7drm Chain F (length=16) Species: 391625 (Plesiocystis pacifica SIR-1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
LFIEDLGKVTLAIGEE
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7drm Molecular mechanism underlying substrate recognition of the peptide macrocyclase PsnB.
Resolution3.28 Å
Binding residue
(original residue number in PDB)
R95 L98 R101
Binding residue
(residue number reindexed from 1)
R92 L95 R98
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016879 ligase activity, forming carbon-nitrogen bonds
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:7drm, PDBe:7drm, PDBj:7drm
PDBsum7drm
PubMed34475564
UniProtA6G4D7

[Back to BioLiP]