Structure of PDB 6xp6 Chain D Binding Site BS01
Receptor Information
>6xp6 Chain D (length=182) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DIVADHVASYGVNLYQSYGPSGQYTHEFDGDEQFYVDLGRKETVWCLPVL
RQFRFDPQFALTNIAVLKHNLNSLIKRSNSTAATNEVPEVTVFSKSPVTL
GQPNILICLVDNIFPPVVNITWLSNGHSVTEGVSETSFLSKSDHSFFKIS
YLTLLPSAEESYDCKVEHWGLDKPLLKHWEPE
Ligand information
>6xp6 Chain F (length=13) Species:
4565
(Triticum aestivum) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
AAPQPELPYPQPG
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6xp6
A high-affinity human TCR-like antibody detects celiac disease gluten peptide-MHC complexes and inhibits T cell activation.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
Y9 F51 R52 F54 F58 N62 H68 N69
Binding residue
(residue number reindexed from 1)
Y10 F53 R54 F55 F59 N63 H69 N70
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0006955
immune response
GO:0019882
antigen processing and presentation
Cellular Component
GO:0016020
membrane
GO:0042613
MHC class II protein complex
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6xp6
,
PDBe:6xp6
,
PDBj:6xp6
PDBsum
6xp6
PubMed
34417258
UniProt
P01909
|DQA1_HUMAN HLA class II histocompatibility antigen, DQ alpha 1 chain (Gene Name=HLA-DQA1)
[
Back to BioLiP
]