Structure of PDB 6vg2 Chain D Binding Site BS01
Receptor Information
>6vg2 Chain D (length=92) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GQIQLWQFLLELLSDSANASCITWEGTNGEFKMTDPDEVARRWGERKSKP
NMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQ
Ligand information
>6vg2 Chain E (length=16) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cagaggatgtggcttc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6vg2
Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Resolution
3.9 Å
Binding residue
(original residue number in PDB)
R337 R340 Y343 K350 R355 Y356
Binding residue
(residue number reindexed from 1)
R59 R62 Y65 K72 R77 Y78
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0006357
regulation of transcription by RNA polymerase II
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6vg2
,
PDBe:6vg2
,
PDBj:6vg2
PDBsum
6vg2
PubMed
33275876
UniProt
Q01543
|FLI1_HUMAN Friend leukemia integration 1 transcription factor (Gene Name=FLI1)
[
Back to BioLiP
]