Structure of PDB 6tzg Chain D Binding Site BS01

Receptor Information
>6tzg Chain D (length=356) Species: 470 (Acinetobacter baumannii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PKDQEIKKLVDQNFKPLLEKYDVPGMAVGVIQNNKKYEMYYGLQSVQDKK
AVNSNTIFELGSVSKLFTATAGGYAKNKGKISFDDTPGKYWKELKNTPID
QVNLLQLATYTSGNLALQFPDEVQTDQQVLTFFKDWKPKNPIGEYRQYSN
PSIGLFGKVVALSMNKPFDQVLEKTIFPALGLKHSYVNVPKTQMQNYAFG
YNQENQPIRVNPGPLDAPAYGVKSTLPDMLSFIHANLNPQKYPTDIQRAI
NETHQGRYQVNTMYQALGWEEFSYPATLQTLLDSNSEQIVMKPNKVTAIS
KEPSVKMYHKTGSTSGFGTYVVFIPKENIGLVMLTNKRIPNEERIKAAYV
VLNAIK
Ligand information
Ligand IDPKY
InChIInChI=1S/C10H12BN4O6P/c12-10(16)8-3-1-2-7(4-8)9-5-15(14-13-9)6-11(17)21-22(18,19)20/h1-5,17H,6H2,(H2,12,16)(H2,18,19,20)
InChIKeyFKHVACRDBKDASW-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385NC(=O)c1cccc(c1)c2cn(CB(O)O[P](O)(O)=O)nn2
OpenEye OEToolkits 2.0.7B(Cn1cc(nn1)c2cccc(c2)C(=O)N)(O)OP(=O)(O)O
FormulaC10 H12 B N4 O6 P
Name[4-(3-aminocarbonylphenyl)-1,2,3-triazol-1-yl]methyl-phosphonooxy-borinic acid
ChEMBL
DrugBank
ZINC
PDB chain6tzg Chain D Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6tzg 1,2,3-Triazolylmethaneboronate: A Structure Activity Relationship Study of a Class of beta-Lactamase Inhibitors againstAcinetobacter baumanniiCephalosporinase.
Resolution1.816 Å
Binding residue
(original residue number in PDB)		S64 Y150 T313 S315 S317
Binding residue
(residue number reindexed from 1)		S62 Y148 T311 S313 S315
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) S64 K67 Y150 E272 K312 S315
Catalytic site (residue number reindexed from 1) S62 K65 Y148 E270 K310 S313
Enzyme Commision number 3.5.2.6: beta-lactamase.
Gene Ontology
Molecular Function
GO:0008800 beta-lactamase activity
GO:0016787 hydrolase activity
Biological Process
GO:0017001 antibiotic catabolic process
GO:0046677 response to antibiotic
Cellular Component
GO:0030288 outer membrane-bounded periplasmic space

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6tzg, PDBe:6tzg, PDBj:6tzg
PDBsum6tzg
PubMed32502340
UniProtQ6DRA1

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