Structure of PDB 6tv0 Chain D Binding Site BS01

Receptor Information
>6tv0 Chain D (length=155) Species: 616 (Serratia sp. (in: enterobacteria)) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TQSLHHSSSREALTDIIMDAKIRKNLTFEAINEGTGLSLAFVTAALLGQH
PLPEQAARVVAAKLDLDEDAVRLLQTIPLRGSIPSGVPTDPTIYRFYEMV
QIYGSTLKALVHEQFGDGIISAINFKLDIKKVPDPDGGERAVITLDGKYL
PTKPF
Ligand information
Ligand IDOXD
InChIInChI=1S/C2H2O4/c3-1(4)2(5)6/h(H,3,4)(H,5,6)
InChIKeyMUBZPKHOEPUJKR-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341OC(=O)C(O)=O
ACDLabs 10.04O=C(O)C(=O)O
OpenEye OEToolkits 1.5.0C(=O)(C(=O)O)O
FormulaC2 H2 O4
NameOXALIC ACID
ChEMBLCHEMBL146755
DrugBankDB03902
ZINCZINC000006021239
PDB chain6tv0 Chain F Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6tv0 Detecting the nature and solving the crystal structure of a contaminant protein from an opportunistic pathogen.
Resolution1.96 Å
Binding residue
(original residue number in PDB)		I120 S122 L151
Binding residue
(residue number reindexed from 1)		I119 S121 L150
Annotation score1
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 05:53:12 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6tv0', asym_id = 'D', bs = 'BS01', title = 'Detecting the nature and solving the crystal str...ntaminant protein from an opportunistic pathogen.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6tv0', asym_id='D', bs='BS01', title='Detecting the nature and solving the crystal str...ntaminant protein from an opportunistic pathogen.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003677,0008824,0009439', uniprot = '', pdbid = '6tv0', asym_id = 'D'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003677,0008824,0009439', uniprot='', pdbid='6tv0', asym_id='D')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>