Structure of PDB 6tmt Chain D Binding Site BS01

Receptor Information
>6tmt Chain D (length=545) Species: 273133 (Pseudomonas phage EL) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SQTLLVHGKDAQGIIKQVLSEVYDAVTSTMGPNGQLVMIKNGVSTKTTKD
GVTVARSIRFADEAHELVNRVITEPATKTDEECGDGTTTTIMLTHALYHL
FKDFPGFQHHRNIEDLVERVIQRLESMAIRVEVDDPRLYQVALTSSNQDE
KLARLVSELYANNKGSYPDIELKEGVNFEDQIEQTTGRTIRMFYANPWFA
KGHQGGVTELTGFTAFVIDRRIDKEDTQKLIDGVNHLVKTHKQHLALPIL
LIARSFEEAANSTLMQLNAAHPTLVEDGRPWLIPLSTPGTSELQDIAVML
NAPMLSDVADLTKLDTHSINGQHGQLELGGNRSILKSTTPKDEDRIEQHA
RGIEELLEGFSLSDKFSVRARYNERRIRTLRGKLITISVGGETYSEVKER
VDRYEDVVKAIRSALENGILPGGGVSLVKAVFGTIKEGLEDKDQSAEFAK
RYINSGIANELMRLSTIQHKLLFKDTALYKENGSFHFNDDWLNTPTVMNL
ATGEIGTPEGLGIYDTAYASITALKGGLQTAKILATTKTLILGEK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6tmt Chain D Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6tmt Structure and conformational cycle of a bacteriophage-encoded chaperonin.
Resolution4.03 Å
Binding residue
(original residue number in PDB)		D86 D412
Binding residue
(residue number reindexed from 1)		D85 D406
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0042802 identical protein binding
GO:0046872 metal ion binding
GO:0140662 ATP-dependent protein folding chaperone
Biological Process
GO:0006457 protein folding
GO:0042026 protein refolding

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6tmt, PDBe:6tmt, PDBj:6tmt
PDBsum6tmt
PubMed32339190
UniProtQ2Z0T5

[Back to BioLiP]