Structure of PDB 6prm Chain D Binding Site BS01
Receptor Information
>6prm Chain D (length=446) Species:
1872678
(Pseudoalteromonas fuliginea) [
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KPNIVLIFADDAGFGDFGFQGSTQLKTPNLDKLAQSGVRFTQGYVSDSTC
GPSRAGLMTGKYQQRFGYEEINVPGFMSGNSALKGADMGLPLDQKTMGDY
LKEQGYKTAVFGKWHLGDADRFHPLKRGFDTFLGFRGGDRSYFNYSEQEM
KNGNKHFFDKKLERDFGNYEEPKEYLTDVLGKEAAKYIEQNKDEPFFIYL
AFNAVHTPLESDPKDLAKFPNLTGKRKELAAMTLGLDRASGYVLDKLKEL
GLDDNTIVVFSNDNGGPSDKNASNNAPLAGTKSNQLEGGIRVPFLISWPK
HIKPGSTYDYPVSTLDLLPTFYSAAKGKALGSDIDGVDLLPYIQGENTAR
PHKVMYWKKENRAVIRDNDWKLIRYPDRPAELYDLSSDISEQTDLAAKNP
ERVKTMFKSLFEWELTLERPRWLLKRKYEKYDIDRMDKYRLPATQP
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
6prm Chain D Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
6prm
Insights into the kappa / iota-carrageenan metabolism pathway of some marinePseudoalteromonasspecies.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
D37 D38 C77 D290 N291
Binding residue
(residue number reindexed from 1)
D10 D11 C50 D263 N264
Annotation score
4
External links
PDB
RCSB:6prm
,
PDBe:6prm
,
PDBj:6prm
PDBsum
6prm
PubMed
31886414
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