Structure of PDB 6pij Chain D Binding Site BS01

Receptor Information
>6pij Chain D (length=338) Species: 666 (Vibrio cholerae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KLPTNLAYERSIDPSDVCFFVVWPDDRKTPLTYNSRTLLGQMEAKSLAYD
VSGQPIKSATAEALAQGNPHQVDFCHVPYGASHIECSFSVSFSSELRQPY
KCNSSKVKQTLVQLVELYETKIGWTELATRYLMNICNGKWLWKNTRKAYC
WNIVLTPWPWNGEKVGFEDIRTNYTSRQDFKNNKNWSAIVEMIKTAFSST
DGLAIFEVRATLHLPTNAMVRPSQVFTEKQNSRVFQSTTIDGERSPILGA
FKTGAAIATIDDWYPEATEPLRVGRFGVHREDVTCYRHPSTGKDFFSILQ
QAEHYIEVLSANKTPAQETINDMHFLMANLIKGGMFQH
Ligand information
>6pij Chain 1 (length=60) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cugauaacuuacaggacgcuuuggcuucauugcuuuucaggugaacugcc
gaguagguag
.............................................<<<<<
.....>>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6pij Structural basis of DNA targeting by a transposon-encoded CRISPR-Cas system.
Resolution2.9 Å
Binding residue
(original residue number in PDB)
Y9 R11 L39 L40 H71 Y101 K102 K144 Q225 F227 F262 K263 A266 R283 R291 K343 G344 G345 M346
Binding residue
(residue number reindexed from 1)
Y8 R10 L38 L39 H70 Y100 K101 K143 Q224 F226 F251 K252 A255 R272 R280 K332 G333 G334 M335
External links