Structure of PDB 6oay Chain D Binding Site BS01

Receptor Information
>6oay Chain D (length=570) Species: 83333 (Escherichia coli K-12) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGV
GKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLK
GVLNDLAKQEGNVILFIDELHTMAGNMLKPALARGELHCVGATTLDEYRQ
YIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIV
AAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKRLLRNKVTDAEIA
EVLARWTGIPVSRMMESEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRS
RAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDEAMVRIDMSEF
MEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVF
NILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHM
KELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLE
ERGYEIHISDEALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGE
LVPGKVIRLEVNEDRIVAVQ
Ligand information
>6oay Chain P (length=26) Species: 9913 (Bos taurus) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
AAAAAAAAAAAAAAAAAAAAAAAAAA
Receptor-Ligand Complex Structure
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PDB6oay Structural basis for substrate gripping and translocation by the ClpB AAA+ disaggregase.
Resolution3.3 Å
Binding residue
(original residue number in PDB)		K250 Y251 R252 G652 Y653 V654
Binding residue
(residue number reindexed from 1)		K90 Y91 R92 G365 Y366 V367
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0042802 identical protein binding
Biological Process
GO:0009408 response to heat
GO:0034605 cellular response to heat
GO:0042026 protein refolding
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6oay, PDBe:6oay, PDBj:6oay
PDBsum6oay
PubMed31160557
UniProtP63284|CLPB_ECOLI Chaperone protein ClpB (Gene Name=clpB)

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