Structure of PDB 6lax Chain D Binding Site BS01

Receptor Information
>6lax Chain D (length=90) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TRPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVKRSLKMRGQA
FVIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIA
Ligand information
>6lax Chain A (length=55) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggcaucgugccucgcauugcacuccgcggggcgauaaguccugaaaaggg
auguc
<<<<<<.<<<<<<<<..........>>>>>>>>......<<<....>>>>
>>>>>
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6lax SAM-VI riboswitch structure and signature for ligand discrimination.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		Y13 K23 K46 R47 K50 R52 Q54 F56 K88 D92
Binding residue
(residue number reindexed from 1)		Y8 K18 K41 R42 K45 R47 Q49 F51 K83 D87
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:6lax, PDBe:6lax, PDBj:6lax
PDBsum6lax
PubMed31844059
UniProtP09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A (Gene Name=SNRPA)

[Back to BioLiP]