Structure of PDB 6k0a Chain D Binding Site BS01

Receptor Information
>6k0a Chain D (length=226) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RIDINRIEKEEDIKLLKELKWNGFVFYQYDDEFSKDRYEEVKAIAESYKL
KVYSGVKIKTESSKQLRDKVKKFRNKCHIILIEGGVLKINRAAVELHDVD
ILSTPELGRKDSGIDHVLARLASNHRVAIELNFKTLLNKDGYERARTLLF
FRNNLKLAKKFDVPVVISTDAENKYQIKNPYDLRAFLNTLVEPLYAKKIM
ETAYKICDFRDYLMRDNVVRYGVEII
Ligand information
>6k0a Chain X (length=258) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggagggggcuggugacuuuccccucuuuaagaggggaggaaguuccgccc
accccauuuaugggcagcguccccugagaaggggcgggagaugcagcaga
aacgacacggcuccggaagagaugacgaugauagugaaaguugaggacuu
ccggagaaccggugaaacgggcaucuccccugcccggggugcaagccggu
uucggcgcuuagccgaaugucaccgaaauuacagaaggcgggcuauagcc
cccauuuu
<<.<<<<<<<<<<<<<...<<<<<<<...>>>>>>>.....[[.(((((<
<<<<<......<<<<<....<<<<<....>>>>>.<<<<<<<<<......
.......<<<<<<<<<<<.......<...................>..>>
>>>>>>..>>>.........>>>>>>>>>.>>>>>>>>>>>...<<<<..
..>>>>............>>>>>>............)))))]]...>>>>
>>>.>>..
Receptor-Ligand Complex Structure
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PDB6k0a Cryo-electron microscopy structure of an archaeal ribonuclease P holoenzyme.
Resolution4.6 Å
Binding residue
(original residue number in PDB)		K21 K52 Y182 R185
Binding residue
(residue number reindexed from 1)		K20 K51 Y181 R184
Enzymatic activity
Enzyme Commision number 3.1.26.5: ribonuclease P.
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0004526 ribonuclease P activity
Biological Process
GO:0001682 tRNA 5'-leader removal
GO:0008033 tRNA processing
Cellular Component
GO:0005737 cytoplasm
GO:0030677 ribonuclease P complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6k0a, PDBe:6k0a, PDBj:6k0a
PDBsum6k0a
PubMed31197137
UniProtQ58539|RNP3_METJA Ribonuclease P protein component 3 (Gene Name=rnp3)

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