Structure of PDB 6ixm Chain D Binding Site BS01
Receptor Information
>6ixm Chain D (length=248) Species:
1345601
(Chryseobacterium sp. CA49) [
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GILDNKVALVTGAGSGIGLAVAHSYAKEGAKVIVSDINEDHGNKAVEDIK
AQGGEASFVKADTSNPEEVEALVKRTVEIYGRLDIACNNAGIGGEQALAG
DYGLDSWRKVLSINLDGVFYGCKYELEQMEKNGGGVIVNMASIHGIVAAP
LSSAYTSAKHAVVGLTKNIGAEYGQKNIRCNAVGPAYIETPLLESLTKEM
KEALISKHPMGRLGKPEEVAELVLFLSSEKSSFMTGGYYLVDGGYTAV
Ligand information
Ligand ID
NAD
InChI
InChI=1S/C21H27N7O14P2/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(32)14(30)11(41-21)6-39-44(36,37)42-43(34,35)38-5-10-13(29)15(31)20(40-10)27-3-1-2-9(4-27)18(23)33/h1-4,7-8,10-11,13-16,20-21,29-32H,5-6H2,(H5-,22,23,24,25,33,34,35,36,37)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
BAWFJGJZGIEFAR-NNYOXOHSSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O)O)O)C(=O)N
Formula
C21 H27 N7 O14 P2
Name
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
ChEMBL
CHEMBL1234613
DrugBank
DB14128
ZINC
PDB chain
6ixm Chain D Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
6ixm
Structure-guided engineering of ChKRED20 from Chryseobacterium sp. CA49 for asymmetric reduction of aryl ketoesters.
Resolution
1.601 Å
Binding residue
(original residue number in PDB)
G13 S16 G17 I18 D37 A62 D63 T64 N90 A91 M141 S143 Y156 K160 P186 A187 I189 L193
Binding residue
(residue number reindexed from 1)
G12 S15 G16 I17 D36 A61 D62 T63 N89 A90 M140 S142 Y155 K159 P185 A186 I188 L192
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
G17 S143 Y156 K160
Catalytic site (residue number reindexed from 1)
G16 S142 Y155 K159
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016491
oxidoreductase activity
View graph for
Molecular Function
External links
PDB
RCSB:6ixm
,
PDBe:6ixm
,
PDBj:6ixm
PDBsum
6ixm
PubMed
30885322
UniProt
X2D0L0
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