Structure of PDB 6ij2 Chain D Binding Site BS01

Receptor Information
>6ij2 Chain D (length=236) Species: 345073 (Vibrio cholerae O395) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LDFDFTMAFQPIVNCRTKEIFGYEALVRGLNNESAYSVISRVNEDNRYLF
DQMCRVKAIALAAKLGLTSKLSINFLPNAIYVPERCIRTTLEAAKRYQFP
IENIMFEFTEAERVEDVNHIKRIVEYYKSLGFQTAIDDFGSGYSGLNLLA
DFQTNIVKVDMGLIRNIHADQVRQSIMKNCLKLFSDLNIQPLAEGVESHA
EFAWLKAAGVELMQGYYFAKPGFESLPSVNPEFSEA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6ij2 Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		Q31 L47 V48 R49 I60 N95 L97 D158 M182 G216 E218 G236 Y237
Binding residue
(residue number reindexed from 1)		Q10 L26 V27 R28 I39 N74 L76 D137 M161 G195 E197 G215 Y216
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6ij2, PDBe:6ij2, PDBj:6ij2
PDBsum6ij2
PubMed31647518
UniProtA0A0H3AJ04

[Back to BioLiP]