Structure of PDB 6eot Chain D Binding Site BS01

Receptor Information
>6eot Chain D (length=832) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LEPFYVERYSWSQLKKLLADTRKYHKAPHDFMFVKRNDPDGPHSDRIYYL
AMRENTLFYSEIPKTINRAAVLMLSWKPLLDLYSREEELLRERKRIGTVG
IASYDYHQGSGTFLFQAGSGIYHVKDGGPQGFTQQPLRPNLVETSCPNIR
MDPKLCPADPDWIAFIHSNDIWISNIVTREERRLTYVHNELANMEEDARS
AGVATFVLQEEFDRYSGYWWCPKAETTPSGGKILRILYEENDESEVEIIH
VTSPMLETRRADSFRYPKTGTANPKVTFKMSEIMIDAEGRIIDVIDKELI
QPFEILFEGVEYIARAGWTPEGKYAWSILLDRSQTRLQIVLISPELFIPV
EDDVMERQRLIESVPDSVTPLIIYEETTDIWINIHDIFHVFPQSHEEEIE
FIFASECKTGFRHLYKITSILKESKYKRSSGGLPAPSDFKCPIKEEIAIT
SGEWEVLGRHGSNIQVDEVRRLVYFEGTKDSPLEHHLYVVSYVNPGEVTR
LTDRGYSHSCCISQHCDFFISKYSNQKNPHCVSLYKLSSPEDDPTCKTKE
FWATILDSAGPLPDYTPPEIFSFESTTGFTLYGMLYKPHDLQPGKKYPTV
LFIYGGPQVQLVNNRFKGVKYFRLNTLASLGYVVVVIDNRGSCHRGLKFE
GAFKYKMGQIEIDDQVEGLQYLASRYDFIDLDRVGIHGWSYGGYLSLMAL
MQRSDIFRVAIAGAPVTLWIFYDTGYTERYMGHPDQNEQGYYLGSVAMQA
EKFPSEPNRLLLLHGFLDENVHFAHTSILLSFLVRAGKPYDLQIYPQERH
SIRVPESGEHYELHLLHYLQENLGSRIAALKV
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6eot Structures and mechanism of dipeptidyl peptidases 8 and 9, important players in cellular homeostasis and cancer.
Resolution3.5 Å
Binding residue
(original residue number in PDB)		R69 H72 R160 E275 E276 H525 Y669 W754 S755 V781 Y787 Y791 H865 S866 I867 G873 E877
Binding residue
(residue number reindexed from 1)		R22 H25 R95 E210 E211 H460 Y604 W689 S690 V716 Y722 Y726 H800 S801 I802 G808 E812
Enzymatic activity
Catalytic site (original residue number in PDB) Y669 S755 Y756 D833 H865
Catalytic site (residue number reindexed from 1) Y604 S690 Y691 D768 H800
Enzyme Commision number 3.4.14.5: dipeptidyl-peptidase IV.
Gene Ontology
Molecular Function
GO:0004177 aminopeptidase activity
GO:0005515 protein binding
GO:0008236 serine-type peptidase activity
GO:0008239 dipeptidyl-peptidase activity
Biological Process
GO:0006508 proteolysis
GO:0006915 apoptotic process
GO:0006955 immune response
GO:0043069 negative regulation of programmed cell death
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6eot, PDBe:6eot, PDBj:6eot
PDBsum6eot
PubMed29382749
UniProtQ6V1X1|DPP8_HUMAN Dipeptidyl peptidase 8 (Gene Name=DPP8)

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