Structure of PDB 6c0z Chain D Binding Site BS01

Receptor Information
>6c0z Chain D (length=137) Species: 882800 (Methylorubrum extorquens DSM 13060) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MHVTIEQAEKAIQAARAKAVELGTQMCIAIVDSGGNLKAFHRMDGAWVGS
IDIAQKKAKTAVFFGMKTGQIGALSQPGGSLYGIEHSNQGLITFPGGIPI
VDADGEMSGAIGVSGSSVENDDAVALAGASAIGDTEL
Ligand information
Ligand ID21H
InChIInChI=1S/C2H6O3/c3-1-5-2-4/h3-4H,1-2H2
InChIKeyARZLUCYKIWYSHR-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01
CACTVS 3.385
OCOCO
OpenEye OEToolkits 1.7.6C(O)OCO
FormulaC2 H6 O3
Nameoxydimethanol
ChEMBL
DrugBank
ZINC
PDB chain6c0z Chain D Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6c0z Crystal structure of Efga form Methylobacterium extorquens in complex with formaldehyde
Resolution1.83 Å
Binding residue
(original residue number in PDB)
W63 F110 S130 S132 D137
Binding residue
(residue number reindexed from 1)
W47 F94 S114 S116 D121
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6c0z, PDBe:6c0z, PDBj:6c0z
PDBsum6c0z
PubMed
UniProtP0DX96|EFGA_METEP Formaldehyde-sensing protein EfgA (Gene Name=efgA)

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