Structure of PDB 6a5y Chain D Binding Site BS01
Receptor Information
>6a5y Chain D (length=211) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
EDMPVERILEAELAVEDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDD
QVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIF
DRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKV
YASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTP
IDTFLMEMLEA
Ligand information
>6a5y Chain F (length=13) Species:
9606
(Homo sapiens) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
RHKILHRLLQEGS
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6a5y
Ligand binding and heterodimerization with retinoid X receptor alpha (RXR alpha ) induce farnesoid X receptor (FXR) conformational changes affecting coactivator binding
Resolution
2.1 Å
Binding residue
(original residue number in PDB)
F277 V280 K284 R302 F450 E453 E456
Binding residue
(residue number reindexed from 1)
F31 V34 K38 R56 F204 E207 E210
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003707
nuclear steroid receptor activity
GO:0008270
zinc ion binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
Cellular Component
GO:0005634
nucleus
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6a5y
,
PDBe:6a5y
,
PDBj:6a5y
PDBsum
6a5y
PubMed
30275017
UniProt
P19793
|RXRA_HUMAN Retinoic acid receptor RXR-alpha (Gene Name=RXRA)
[
Back to BioLiP
]