Structure of PDB 5vfx Chain D Binding Site BS01

Receptor Information
>5vfx Chain D (length=99) Species: 1502 (Clostridium perfringens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KDLNLYAKELVDVVNYLMKKNQLVFSRNNKFIYVNTETIKSMLEKRNYDT
VDGKLYLWRELEWIECAEDRFNKRIKIDGENMYAVVIKYSSYSILKRLY
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5vfx Crystal structure of TcpK in complex with oriT DNA of the antibiotic resistance plasmid pCW3.
Resolution2.81 Å
Binding residue
(original residue number in PDB)
R28 R71 R75 N82 Y84
Binding residue
(residue number reindexed from 1)
R27 R70 R74 N81 Y83
Binding affinityPDBbind-CN: Kd=360nM
Enzymatic activity
Enzyme Commision number ?
External links