Structure of PDB 5ui3 Chain D Binding Site BS01

Receptor Information
>5ui3 Chain D (length=305) Species: 3055 (Chlamydomonas reinhardtii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
STVDRLKKLRLITAIKTPYLANGKFDLPAYDALVSHQIENGVEGLIVGGT
TGEGHLMSWDEHVMLIAHTVNAFGDKTAVIGNTGSNSTREALHATEQGFA
VGMHASLQINPYYGKTSKAGLLNHFNAVLNEGPAVVYNVPGRTGQDIPDD
VVMEICQHSNFLGMKECTGNSRIKNYTSKGVNCWSGNDDESHDARHSNGA
VGVISVTSNVIPGLMHKLMHGSPDPQLNADLKELMAWMFCEPNPISLNTA
LAMCGLARPVFRLPYVPLSRAQREKGAVLLNKVQEHIPGCKSVRVMEDHE
FILVG
Ligand information
Ligand IDAKG
InChIInChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
InChIKeyKPGXRSRHYNQIFN-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(O)C(=O)CCC(=O)O
OpenEye OEToolkits 1.7.6C(CC(=O)O)C(=O)C(=O)O
CACTVS 3.385OC(=O)CCC(=O)C(O)=O
FormulaC5 H6 O5
Name2-OXOGLUTARIC ACID
ChEMBLCHEMBL1686
DrugBankDB08845
ZINCZINC000001532519
PDB chain5ui3 Chain D Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5ui3 Crystal structure of DHDPS from chlamydomonas reinhardtii
Resolution2.0 Å
Binding residue
(original residue number in PDB)		A31 T67 T68 Y154 R159 K182 N260
Binding residue
(residue number reindexed from 1)		A14 T50 T51 Y137 R142 K165 N243
Annotation score1
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Apr 4 10:49:40 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '5ui3', asym_id = 'D', bs = 'BS01', title = 'Crystal structure of DHDPS from chlamydomonas reinhardtii'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='5ui3', asym_id='D', bs='BS01', title='Crystal structure of DHDPS from chlamydomonas reinhardtii')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008840,0009089,0016829', uniprot = '', pdbid = '5ui3', asym_id = 'D'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008840,0009089,0016829', uniprot='', pdbid='5ui3', asym_id='D')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>