Structure of PDB 5t6b Chain D Binding Site BS01

Receptor Information
>5t6b Chain D (length=393) Species: 46161 (Actinomadura kijaniata) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARCRVCGDTVDEFLDLGRQPLSDRFLTPADTDGEFFYRLAVGRCHACGMV
QLTEEVPRHLMFSVMREHFAMVARDFLATELTGPDPFVVEIGCNDGIMLR
AVHEAGVRHLGFEPSAGVAEVARSRGVRVRTEFFEKATATAVRESEGPAD
VIYAANTMCHIPYLESVFQGADALLGPDGVVVFEDPYLGDIVAKTSFDQI
YDEHFYLFSAGSVAAMAERFGFELVDVERLPVHGGEVRYTLARRGARTPT
EAVGRLLAEEREQGLDDLATLRTFAANVHTVRDELVALLTRLRAEGHRVV
GYGATAKSATVTNFCGIGPDLVSFVCDTTPGKQHRLTPGKHLPVRPAEAF
ADPYPDYALLFAWNHAEEIMAKEQEFHQAGGRWILYVPEVHIR
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5t6b Chain D Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5t6b Structural studies on KijD1, a sugar C-3'-methyltransferase.
Resolution2.0 Å
Binding residue
(original residue number in PDB)		C13 C16 C54 C57
Binding residue
(residue number reindexed from 1)		C3 C6 C44 C47
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5t6b, PDBe:5t6b, PDBj:5t6b
PDBsum5t6b
PubMed27595766
UniProtB3TMQ9

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