Structure of PDB 5or4 Chain D Binding Site BS01

Receptor Information
>5or4 Chain D (length=371) Species: 510516 (Aspergillus oryzae RIB40) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TLPTTASSSTAVASSQLDQLANFAYNVTTDSVAGCTLQNLRVRRDWRAFS
KTQKKDYINSVLCLQKLPSRTPAHLAPGARTRYDDFVATHINQTQIIHYT
GTFLAWHRYFIYEFEQALRDECSYTGDYPYWNWGADADNMEKSQVFDGSE
TSMSGNGEYIPNQGDIKLLLGNYPAIDLPPGSGGGCVTSGPFKDYKLNLG
PAALSLPGGNMTAAANPLTYNPRCMKRSLTTEILQRYNTFPKIVELILDS
DDIWDFQMTMQGVPGSGSIGVHGGGHYSMGGDPGRDVYVSPGDTAFWLHH
GMIDRVWWIWQNLDLRKRQNAISGTGTFMNNPASPNTTLDTVIDLGYANG
GPIAMRDLMSTTAGPFCYVYL
Ligand information
Ligand IDCU
InChIInChI=1S/Cu/q+2
InChIKeyJPVYNHNXODAKFH-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Cu+2]
CACTVS 3.341[Cu++]
FormulaCu
NameCOPPER (II) ION
ChEMBL
DrugBankDB14552
ZINC
PDB chain5or4 Chain D Residue 2001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5or4 A new crystal form of Aspergillus oryzae catechol oxidase and evaluation of copper site structures in coupled binuclear copper enzymes.
Resolution2.445 Å
Binding residue
(original residue number in PDB)
H102 H110 H119
Binding residue
(residue number reindexed from 1)
H90 H98 H107
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004097 catechol oxidase activity
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Cellular Component
GO:0005575 cellular_component

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:5or4, PDBe:5or4, PDBj:5or4
PDBsum5or4
PubMed29715329
UniProtQ2UNF9

[Back to BioLiP]