Structure of PDB 5mzm Chain D Binding Site BS01
Receptor Information
>5mzm Chain D (length=271) Species:
10090
(Mus musculus) [
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GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGLRTDSPKAHVTHHPRSKGEVTLRCW
ALGFYPADITLTWQLNGEETQDMELVETRPAGDGTFQKWASVVVPLGKEQ
NYTCRVYHEGLPEPLTLRWEP
Ligand information
>5mzm Chain F (length=9) Species:
10090
(Mus musculus) [
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MCPRMTAVM
Receptor-Ligand Complex Structure
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PDB
5mzm
The Immunogenicity of a Proline-Substituted Altered Peptide Ligand toward the Cancer-Associated TEIPP Neoepitope Trh4 Is Unrelated to Complex Stability.
Resolution
2.4 Å
Binding residue
(original residue number in PDB)
Y7 E63 K66 Q70 W73 S77 Y84 F116 Y123 T143 W147 H155 Y156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 E63 K66 Q70 W73 S77 Y84 F116 Y123 T143 W147 H155 Y156 Y159 E163 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5mzm
,
PDBe:5mzm
,
PDBj:5mzm
PDBsum
5mzm
PubMed
29507106
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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