Structure of PDB 5i2i Chain D Binding Site BS01

Receptor Information

>5i2i Chain D (length=216) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

QVQLKQSGPGLVQPSQSLSITCTVSGFSLTNYGVHWVRQSPGKGLEWLGV
IWSGGNTDYNTPFTSRLSINKDNSKSQVFFKMNSLQSNDTAIYYCARALT
YYDYEFAYWGQGTLVTVSAASTKGPSVFPLAPSSGGTAALGCLVKDYFPE
PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNV
NHKPSNTKVDKRVEPK

Ligand information

>5i2i Chain F (length=12) Species: 32630 (synthetic construct) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

GQQDLSTRRLKG

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5i2i Natural and non-natural amino-acid side-chain substitutions: affinity and diffraction studies of meditope-Fab complexes.
Resolution	2.551 Å
Binding residue (original residue number in PDB)	Q39 P41 I92 Y94 Q111 E154 P173
Binding residue (residue number reindexed from 1)	Q39 P41 I92 Y94 Q111 E150 P169

External links

PDB	RCSB:5i2i, PDBe:5i2i, PDBj:5i2i
PDBsum	5i2i
PubMed	27834791

[Back to BioLiP]