Structure of PDB 5efj Chain D Binding Site BS01
Receptor Information
>5efj Chain D (length=356) Species:
7955
(Danio rerio) [
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PITGLVYDQRMMLHHNMWDSHHPELPQRISRIFSRHEELRLLSRCHRIPA
RLATEEELALCHSSKHISIIKSSEHMKPRDLNRLGDEYNSIFISNESYTC
ALLAAGSCFNSAQAILTGQVRNAVAIVRPPGHHAEKDTACGFCFFNTAAL
TARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGA
FFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMPIAR
EFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIIL
EGGYNLTSISESMSMCTSMLLGDSPPSLHLTPLKTSATVSINNVLRAHAP
FWSSLR
Ligand information
>5efj Chain F (length=3) Species:
5017
(Bipolaris zeicola) [
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PAA
Receptor-Ligand Complex Structure
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PDB
5efj
Histone deacetylase 6 structure and molecular basis of catalysis and inhibition.
Resolution
1.73 Å
Binding residue
(original residue number in PDB)
S531 P571 H573 H574 G582 F583 D612 H614 F643 E742 G743 Y745
Binding residue
(residue number reindexed from 1)
S90 P130 H132 H133 G141 F142 D171 H173 F202 E301 G302 Y304
Enzymatic activity
Enzyme Commision number
3.5.1.98
: histone deacetylase.
External links
PDB
RCSB:5efj
,
PDBe:5efj
,
PDBj:5efj
PDBsum
5efj
PubMed
27454933
UniProt
F8W4B7
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