Structure of PDB 5e8o Chain D Binding Site BS01
Receptor Information
>5e8o Chain D (length=274) Species:
10090
(Mus musculus) [
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GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAP
WMEQEGPEYWERETQKAKGQEQWFRVSLRNLLGYYNQSAGGSHTLQQMSG
CDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQS
GAAEHYKAYLEGECVEWLHRYLKNGNALRTDSPKAHVTHHPRSKGEVTLR
CWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTFQKWASVVVPLG
KEQNYTCRVYHEGLPEPLTLRWEP
Ligand information
>5e8o Chain F (length=9) Species:
10090
(Mus musculus) [
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MNLRMTAVM
Receptor-Ligand Complex Structure
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PDB
5e8o
The MHC Class I Cancer-Associated Neoepitope Trh4 Linked with Impaired Peptide Processing Induces a Unique Noncanonical TCR Conformer.
Resolution
1.98 Å
Binding residue
(original residue number in PDB)
Y7 E63 K66 Q70 W73 S77 N80 Y84 L95 F116 Y123 W147 H155 Y156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)
Y7 E63 K66 Q70 W73 S77 N80 Y84 L95 F116 Y123 W147 H155 Y156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:5e8o
,
PDBe:5e8o
,
PDBj:5e8o
PDBsum
5e8o
PubMed
26800871
UniProt
P01899
|HA11_MOUSE H-2 class I histocompatibility antigen, D-B alpha chain (Gene Name=H2-D1)
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