Structure of PDB 5e5a Chain D Binding Site BS01
Receptor Information
>5e5a Chain D (length=98) Species:
8355
(Xenopus laevis) [
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KKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGE
ASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSA
Ligand information
>5e5a Chain I (length=146) [
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atcaatatccacctgcagattctaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagcggaattccgctgaacatgccttttgatggag
cagtttccaaatacacttttggtagaatctgcaggtggatattgat
Receptor-Ligand Complex Structure
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PDB
5e5a
Human cytomegalovirus IE1 protein alters the higher-order chromatin structure by targeting the acidic patch of the nucleosome
Resolution
2.809 Å
Binding residue
(original residue number in PDB)
R27 T29 S52 S53 R83 S84 T85
Binding residue
(residue number reindexed from 1)
R4 T6 S29 S30 R60 S61 T62
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
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Molecular Function
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Cellular Component
External links
PDB
RCSB:5e5a
,
PDBe:5e5a
,
PDBj:5e5a
PDBsum
5e5a
PubMed
26812545
UniProt
P02281
|H2B11_XENLA Histone H2B 1.1
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