Structure of PDB 5ds0 Chain D Binding Site BS01

Receptor Information
>5ds0 Chain D (length=358) Species: 1198115 (Thaumarchaeota archaeon SCGC AB-539-E09) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SNADKSMELMKTLMEAFGPSGFEREVNAICKEYMEPYADEVVVDKLGSVT
FIAKGNDRPRILMAGHTDEVGFIVSSISKEGYLTFNTLGGWWSQVLLGQR
VVVRTCKGMVHGIIASKPPHILPPDERKKIVEARDMFIDIGATSEEEAEE
SGVKVGDPIVPWSPFSVIQNGRVAMGKAFDDRIGAFVLMEAIRRMKDQGI
EHPNTVYGSATVQEEVGLRGAQTTAHVVDPDVALVLEVDIAGDVPGKPHE
ALTKMGKGPGLVTYDRSMIPNQPLKEFVINVAKQAQIPLQLSQMSGGGTD
AGRIHMNRAGCPSVVITIPTRHIHSHVGLLSLKDTENAIRLVIELIKRLD
LETVEGFT
Ligand information
Ligand IDCO
InChIInChI=1S/Co/q+2
InChIKeyXLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Co+2]
CACTVS 3.341[Co++]
FormulaCo
NameCOBALT (II) ION
ChEMBL
DrugBankDB14205
ZINC
PDB chain5ds0 Chain D Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5ds0 Crystal structure of TET aminopeptidase from marine sediment archaeon Thaumarchaeota archaeon SCGC AB-539-E09
Resolution2.8 Å
Binding residue
(original residue number in PDB)		H66 D180 E214 E215 E237
Binding residue
(residue number reindexed from 1)		H66 D180 E214 E215 E237
Annotation score3
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004177 aminopeptidase activity
GO:0046872 metal ion binding
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5ds0, PDBe:5ds0, PDBj:5ds0
PDBsum5ds0
PubMed
UniProtM7T295

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