Structure of PDB 5ck3 Chain D Binding Site BS01

Receptor Information

>5ck3 Chain D (length=230) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

YTTLPSVLLIGPSGAGKTALLTLFERGPLLNPDGTSLKNPYRKPIVTSPV
AQTHTSQVPTSVELAVGANEPTSYKVDLTARKFLLIDTPGHPKLRGTTLQ
HLLNPSPPYKSKLKAVIFLLDAAALADSDGDYLSQTASYLYDVLLSLQKR
FHSSIPVLIAANKQDLFTAVPASLVKSRLEHELGRIRKTRQKFKFEEMME
FDMEVEVMGGNVIGDGPGAERWWRWIGERI

Ligand information

Ligand ID

InChI

InChI=1S/Mg/q+2

InChIKey

JLVVSXFLKOJNIY-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mg+2]
CACTVS 3.341	[Mg++]

Formula

Name

MAGNESIUM ION

PDB chain

5ck3 Chain D Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5ck3 Structure and Switch Cycle of SR beta as Ancestral Eukaryotic GTPase Associated with Secretory Membranes.
Resolution	3.2 Å
Binding residue (original residue number in PDB)	T64 S107 D146
Binding residue (residue number reindexed from 1)	T18 S56 D87
Annotation score	4

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:5ck3, PDBe:5ck3, PDBj:5ck3
PDBsum	5ck3
PubMed	26299945
UniProt	G0S401

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