Structure of PDB 5avp Chain D Binding Site BS01

Receptor Information
>5avp Chain D (length=240) Species: 526225 (Geodermatophilus obscurus DSM 43160) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ARTSVTRREYDEWLNEAAALGRALRYPVRPEMVNDSAGIVFGEDQYDAFE
NGLWSREPYEAMVIFESLNEPAVDGLPAAGAPFAEYSGLCDKLMIVHPGK
FCPPHYHQRKTESYEVVLGEMELFYSPKPVQVGEEEVLSFTGMHEGSPWP
DGVALPIGREESYAALTSYRRLRVGDPKFVMHRKHLHAFRCPADSDVPLV
VREVSTYSHEPAPLPDWAGLHDNSFVAAAANSGRLRTAIQ
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain5avp Chain D Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5avp Crystal structure of Geodermatophilus obscurus L-ribose isomerase
Resolution2.9 Å
Binding residue
(original residue number in PDB)		H110 H112 K115 E117 H192
Binding residue
(residue number reindexed from 1)		H105 H107 K110 E112 H187
Annotation score4
Enzymatic activity
Enzyme Commision number 5.3.1.-
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5avp, PDBe:5avp, PDBj:5avp
PDBsum5avp
PubMed
UniProtD2S5K0

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